Informative Path Planning Framework for Active Learning in UAV-based Semantic Mapping

This dataset contains semantic segmentation train-validation-test data splits of (1) the ISPRS Potsdam orthomosaic (https://www.isprs.org/education/benchmarks/UrbanSemLab/2d-sem-label-potsdam.aspx), (2) the RIT-18 landcover orthomosaic (https://github.com/rmkemker/RIT-18), and (3) the industrial environment of the photorealistic Flightmare quadrotor simulator (https://github.com/uzh-rpg/flightmare). All splits are generated by simulating UAV missions at fixed altitudes. We use these datasets in our "An Informative Path Planning Framework for Active Learning in UAV-based Semantic Mapping" paper. Further, it contains (4) model checkpoints of our proposed Bayesian ERFNet framework (https://github.com/dmar-bonn/bayesian_erfnet) pre-trained on Cityscapes, (5) the ISPRS Potsdam and RIT-18 RGB and semantically labelled orthomosaics, and (6) the Flightmare render binary for the industrial environment.

Soil gas diffusion measurements: effect of root mucilage analogue from chia seeds on soil gas diffusivity

The effect of a mucilage analogue from chia seeds without intrinsic respiratory activity on oxygen diffusion was measured at different water contents during wetting-drying cycles in a diffusion chamber experiment. Artificial soils of various particle size distributions were mixed with various amounts of the mucilage analogue. Additionally, environmental scanning electron microscopy (ESEM) was used to visualize mucilage bridges in the dry soil samples.

MicaSense Dual multispectral orthomosaics of PhenoRob Central Experiment in 2021

Reflectance orthomosaics of PhenoRob Central Experiment derived from 2021 multispectral image data.

SugarBeetsUniBonn

This dataset contains point clouds of sugar beet plants in field conditions. The data was recorded at Bundessortenamt and was manually labeled for leaf instance segmentation. If you want to use the dataset please contact me.

µCT images of a sandy soil (200-500µm) mixed with various amounts of mucilage during a drying rewetting cycle

µCt images with a resolution of 11µm

Shape Completion Dataset

Shape completion dataset for sweet peppers. A detailed description of the dataset can be found in our technical report: https://www.ipb.uni-bonn.de/wp-content/papercite-data/pdf/magistri2024arxiv.pdf We additionally provide a small set of python script to load this data: https://github.com/PRBonn/shape_completion_toolkit

Replication data: Innovation context and technology traits explain heterogeneity across studies of agricultural technology adoption

Data to replicate findings of Schulz, D., & Börner, J. (2022). Innovation context and technology traits explain heterogeneity across studies of agricultural technology adoption: A meta‐analysis. Journal of Agricultural Economics, 1477-9552.12521.

PhenoBench

A Large Dataset and Benchmarks for Semantic Image Interpretation in the Agricultural Domain. Please find more information at: https://www.phenobench.org/

RGB-MiniplotBarley: RGB images for nutrient deficiency recognition in barley from soil mini plots

The dataset RGB-MiniplotBarley contains 22164 RGB images of 11 time points 21. jun - 7. jul 2022 of two genotypes of spring barley grown under single-nutrient deficiencies of N, P, K, S, B and one multi-nutrient deficient treatment from miniplot fertilizer trial at Campus Klein-Altendorf of University of Bonn. The images are annotated with plot number, genotype and fertilizer management and have been taken for a Deep Learning approach for nutrient deficiency recognition.

Data to: Root System Architecture Reorganization Under Decreasing Soil Phosphorus Lowers Root System Conductance of Zea Mays

The global supply of phosphorus is decreasing. At the same time, climate change reduces the water availability in most regions of the world. Insights on how decreasing phosphorus availability influences plant architecture is crucial to understand its influence on plant functional properties, such as the root system’s water uptake capacity. In this study we investigated the structural and functional responses of \textit{Zea mays} to varying phosphorus fertilization levels focusing especially on the root system’s conductance. A rhizotron experiment with soils ranging from severe phosphorus deficiency to sufficiency was conducted. We measured architectural parameters of the whole plant and combined them with root hydraulic properties to simulate time-dependent root system conductance of growing plants under different phosphorus levels. We observed changes of the root system architecture, characterized by decreasing crown root elongation and reduced axial root radii with declining phosphorus availability. Modeling revealed that only plants with optimal phosphorus availability sustained a high root system conductance, while all other phosphorus levels led to a significantly lower root system conductance, both under light and severe phosphorus deficiency. We postulate that phosphorus deficiency initially enhances root system function for drought mitigation but eventually reduce biomass and impairs root development and water uptake in prolonged or severe cases of drought. Our results also highlight the fact that root system organization, rather than its total size, is critical to estimate important root functions.