This dataset contains point clouds of sugar beet plants in field conditions. The data was recorded at Bundessortenamt and was manually labeled for leaf instance segmentation. If you want to use the dataset please contact me.

The effect of a mucilage analogue from chia seeds without intrinsic respiratory activity on oxygen diffusion was measured at different water contents during wetting-drying cycles in a diffusion chamber experiment. Artificial soils of various particle size distributions were mixed with various amounts of the mucilage analogue. Additionally, environmental scanning electron microscopy (ESEM) was used to visualize mucilage bridges in the dry soil samples.

Data represent an intercropping field experiment carried out at CKA in the year 2021. Shoot and root data collection was conducted with one faba bean cultivar and two spring wheat cultivars sown at three sowing densities. FTIR spectroscopy was used to define the root masses of the two species.

This data set is generated by the bio-economic farm-level model FarmDyn (https://farmdyn.github.io/documentation/). X_raw.parquet.gzip contains the input data (77 variables), and Y_raw.parquet.gzip contains the corresponding output data (248 output variables). A farm in FarmDyn maximizes its profit based on the what input values are given (e.g. crop prices, farm size, etc.). The output variables are either a farm's decisions of farming activites or the outcomes of its decisions. The data can be read in python by pd.read_parquet.

A sweet pepper dataset which was captured in the CKA glasshouse using PathoBot. It contains differently coloured sweet peppers in various ripening stages. More information, citations and a related previous dataset can be found at http://agrobotics.uni-bonn.de/sweet_pepper_dataset/

The global supply of phosphorus is decreasing. At the same time, climate change reduces the water availability in most regions of the world. Insights on how decreasing phosphorus availability influences plant architecture is crucial to understand its influence on plant functional properties, such as the root system’s water uptake capacity. In this study we investigated the structural and functional responses of \textit{Zea mays} to varying phosphorus fertilization levels focusing especially on the root system’s conductance. A rhizotron experiment with soils ranging from severe phosphorus deficiency to sufficiency was conducted. We measured architectural parameters of the whole plant and combined them with root hydraulic properties to simulate time-dependent root system conductance of growing plants under different phosphorus levels. We observed changes of the root system architecture, characterized by decreasing crown root elongation and reduced axial root radii with declining phosphorus availability. Modeling revealed that only plants with optimal phosphorus availability sustained a high root system conductance, while all other phosphorus levels led to a significantly lower root system conductance, both under light and severe phosphorus deficiency. We postulate that phosphorus deficiency initially enhances root system function for drought mitigation but eventually reduce biomass and impairs root development and water uptake in prolonged or severe cases of drought. Our results also highlight the fact that root system organization, rather than its total size, is critical to estimate important root functions.

The dataset contains 7 maize plants measured on 12 days. This gives 84 maize point clouds (about 90 Mio. points). From these, 49 point clouds (about 60 Mio. points) are labeled. Furthermore, the dataset contains 7 tomato plants measured on 20 days (about 350 Mio. points). This gives 140 point clouds from which 77 point clouds (200 Mio. points) are labeled. Note that we provide temporally consistent labels for each point in the clouds. We provide labeled and unlabeled point clouds, the file name indicates whether the point cloud is annotated or not. For example, M01_0313_a.xyz is labeled, M01_0314.xyz is not labeled. For the tomato plant point clouds, each annotated file contains the x,y,z coordinates, and the label associated with the point. For the maize point clouds. Each file annotated contains the x,y,z coordinates, and the 2 labels associated with the point. For both species, if no labels are provided, the files contain only the x,y,z coordinates. Cite: D. Schunck, F. Magistri, R. A. Rosu, A. Cornelißen, N. Chebrolu, S. Paulus, J. Léon, S. Behnke, C. Stachniss, H. Kuhlmann, and L. Klingbeil, “Pheno4D: A spatio-temporal dataset of maize and tomato plant point clouds for phenotyping and advanced plant analysis,” PLOS ONE, vol. 16, iss. 8, pp. 1-18, 2021. doi:10.1371/journal.pone.0256340.

Reflectance orthomosaics of PhenoRob Central Experiment derived from 2021 multispectral image data.